Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Smc5Q8CG46 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Smc5Q8CG46 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Smc5Q8CG46 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Smc5Q8CG46 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Gm45384-201ENSMUST00000210451 277 ntBASIC15.58■□□□□ 0.08
Smc5Q8CG46 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.58■□□□□ 0.08
Smc5Q8CG46 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Gm24136-201ENSMUST00000083374 165 ntBASIC15.58■□□□□ 0.08
Smc5Q8CG46 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.58■□□□□ 0.08
Smc5Q8CG46 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.58■□□□□ 0.08
Smc5Q8CG46 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Smc5Q8CG46 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.57■□□□□ 0.08
Smc5Q8CG46 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.57■□□□□ 0.08
Smc5Q8CG46 Gm4768-201ENSMUST00000206199 686 ntBASIC15.57■□□□□ 0.08
Smc5Q8CG46 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.57■□□□□ 0.08
Smc5Q8CG46 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Smc5Q8CG46 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Gm7029-201ENSMUST00000173226 450 ntBASIC15.56■□□□□ 0.08
Smc5Q8CG46 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.56■□□□□ 0.08
Smc5Q8CG46 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.56■□□□□ 0.08
Smc5Q8CG46 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Gm6180-201ENSMUST00000065243 498 ntBASIC15.56■□□□□ 0.08
Smc5Q8CG46 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 AC130671.2-201ENSMUST00000227224 1621 ntBASIC15.56■□□□□ 0.08
Smc5Q8CG46 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc5Q8CG46 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms