Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Gm11618-201ENSMUST00000117946 267 ntBASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Mir339-201ENSMUST00000083659 96 ntBASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Chmp2bQ8BJF9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Gm27437-201ENSMUST00000183429 107 ntBASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Mir6977-201ENSMUST00000184960 64 ntBASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Gm44124-201ENSMUST00000204159 472 ntBASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp2bQ8BJF9 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gm14704-201ENSMUST00000120300 874 ntBASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gm8463-201ENSMUST00000208573 613 ntBASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.92□□□□□ -0.34
Chmp2bQ8BJF9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms