Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Gm37922-201ENSMUST00000195596 455 ntBASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ccdc40Q8BI79 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm11814-201ENSMUST00000119515 929 ntBASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm12138-201ENSMUST00000122180 951 ntBASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ccdc40Q8BI79 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gm11803-201ENSMUST00000119966 444 ntBASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Ccdc40Q8BI79 Gm24196-201ENSMUST00000179161 110 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms