Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.32□□□□□ -0.44
Trim50Q810I2 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.32□□□□□ -0.44
Trim50Q810I2 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.32□□□□□ -0.44
Trim50Q810I2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.32□□□□□ -0.44
Trim50Q810I2 Gm6222-202ENSMUST00000182143 629 ntBASIC12.32□□□□□ -0.44
Trim50Q810I2 Gm38092-201ENSMUST00000195600 653 ntBASIC12.32□□□□□ -0.44
Trim50Q810I2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.32□□□□□ -0.44
Trim50Q810I2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trim50Q810I2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim50Q810I2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Gm11591-201ENSMUST00000120063 702 ntBASIC12.31□□□□□ -0.44
Trim50Q810I2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim50Q810I2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.31□□□□□ -0.44
Trim50Q810I2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim50Q810I2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.31□□□□□ -0.44
Trim50Q810I2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.31□□□□□ -0.44
Trim50Q810I2 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.31□□□□□ -0.44
Trim50Q810I2 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Snora73a-201ENSMUST00000082453 205 ntBASIC12.31□□□□□ -0.44
Trim50Q810I2 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.31□□□□□ -0.44
Trim50Q810I2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.31□□□□□ -0.44
Trim50Q810I2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.31□□□□□ -0.44
Trim50Q810I2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim50Q810I2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim50Q810I2 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.3□□□□□ -0.44
Trim50Q810I2 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.3□□□□□ -0.44
Trim50Q810I2 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim50Q810I2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim50Q810I2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms