Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Prpf38bQ80SY5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Gm11637-201ENSMUST00000120601 592 ntBASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Gm6407-201ENSMUST00000176468 549 ntBASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Gm45118-201ENSMUST00000208928 825 ntBASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Prpf38bQ80SY5 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm20426-201ENSMUST00000173657 440 ntBASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm18584-201ENSMUST00000203098 964 ntBASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Matn2-203ENSMUST00000226766 3252 ntBASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prpf38bQ80SY5 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prpf38bQ80SY5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prpf38bQ80SY5 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms