Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pif1Q80SX8 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.75□□□□□ -0.53
Pif1Q80SX8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm25214-201ENSMUST00000104573 129 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm13492-201ENSMUST00000119772 665 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm15547-201ENSMUST00000122152 333 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm27341-201ENSMUST00000183570 106 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm22058-201ENSMUST00000083393 310 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.74□□□□□ -0.53
Pif1Q80SX8 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pif1Q80SX8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Gm23363-201ENSMUST00000175024 79 ntBASIC11.73□□□□□ -0.53
Pif1Q80SX8 Gm27046-201ENSMUST00000182160 463 ntBASIC11.73□□□□□ -0.53
Pif1Q80SX8 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.73□□□□□ -0.53
Pif1Q80SX8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.73□□□□□ -0.53
Pif1Q80SX8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.73□□□□□ -0.53
Pif1Q80SX8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.73□□□□□ -0.53
Pif1Q80SX8 Daam2-202ENSMUST00000224595 1926 ntBASIC11.73□□□□□ -0.53
Pif1Q80SX8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pif1Q80SX8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms