Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Gm12928-201ENSMUST00000117115 573 ntBASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Smarcd3Q6P9Z1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smarcd3Q6P9Z1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smarcd3Q6P9Z1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Smarcd3Q6P9Z1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Gm2495-201ENSMUST00000191160 466 ntBASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Smarcd3Q6P9Z1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Smarcd3Q6P9Z1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms