Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gm23931-201ENSMUST00000103842 109 ntBASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gm37424-201ENSMUST00000191727 561 ntBASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gm45880-201ENSMUST00000213041 853 ntBASIC12.82□□□□□ -0.36
Casc4Q6P2L7 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Mir339-201ENSMUST00000083659 96 ntBASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Casc4Q6P2L7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Snord83b-201ENSMUST00000104546 94 ntBASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Casc4Q6P2L7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm5187-201ENSMUST00000117317 991 ntBASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm11591-201ENSMUST00000120063 702 ntBASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm25261-201ENSMUST00000157416 134 ntBASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm17420-201ENSMUST00000164753 153 ntBASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Casc4Q6P2L7 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms