Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC9.55□□□□□ -0.88
Foxc1Q61572 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Foxc1Q61572 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Foxc1Q61572 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.55□□□□□ -0.88
Foxc1Q61572 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Foxc1Q61572 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Foxc1Q61572 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm12390-201ENSMUST00000117897 397 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm7289-201ENSMUST00000168993 734 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm29608-201ENSMUST00000190444 463 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC9.54□□□□□ -0.88
Foxc1Q61572 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm37452-201ENSMUST00000194416 1160 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm38671-201ENSMUST00000200573 130 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm43531-201ENSMUST00000200676 1114 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm43630-201ENSMUST00000201550 776 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm7287-201ENSMUST00000205267 602 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Itm2b-204ENSMUST00000228637 783 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Foxc1Q61572 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Gm8775-201ENSMUST00000170943 1327 ntBASIC9.54□□□□□ -0.88
Foxc1Q61572 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Foxc1Q61572 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Foxc1Q61572 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC9.53□□□□□ -0.88
Foxc1Q61572 Gm12788-201ENSMUST00000119090 308 ntBASIC9.53□□□□□ -0.88
Foxc1Q61572 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms