Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ift88Q61371 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ift88Q61371 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Ift88Q61371 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ift88Q61371 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.95□□□□□ -0.18
Ift88Q61371 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Gm8213-201ENSMUST00000118191 441 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Gm10156-201ENSMUST00000122364 462 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ift88Q61371 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.95□□□□□ -0.18
Ift88Q61371 Gm17208-201ENSMUST00000168388 535 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Gm27390-201ENSMUST00000184516 176 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Gm7287-201ENSMUST00000205267 602 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.95□□□□□ -0.18
Ift88Q61371 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Ift88Q61371 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Ift88Q61371 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ift88Q61371 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.94□□□□□ -0.18
Ift88Q61371 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.94□□□□□ -0.18
Ift88Q61371 Gm26185-201ENSMUST00000157692 266 ntBASIC13.94□□□□□ -0.18
Ift88Q61371 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Ift88Q61371 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.94□□□□□ -0.18
Ift88Q61371 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.94□□□□□ -0.18
Ift88Q61371 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.94□□□□□ -0.18
Ift88Q61371 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.94□□□□□ -0.18
Ift88Q61371 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Ift88Q61371 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ift88Q61371 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Ift88Q61371 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.93□□□□□ -0.18
Ift88Q61371 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Gm11637-201ENSMUST00000120601 592 ntBASIC13.93□□□□□ -0.18
Ift88Q61371 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Ift88Q61371 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.93□□□□□ -0.18
Ift88Q61371 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ift88Q61371 Gm37042-201ENSMUST00000193816 581 ntBASIC13.93□□□□□ -0.18
Ift88Q61371 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms