Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gm28693-202ENSMUST00000190758 331 ntBASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.4□□□□□ -0.26
Trim43aQ3TL54 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim43aQ3TL54 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trim43aQ3TL54 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.39□□□□□ -0.27
Trim43aQ3TL54 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Gm15806-201ENSMUST00000120696 955 ntBASIC13.39□□□□□ -0.27
Trim43aQ3TL54 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim43aQ3TL54 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm14760-201ENSMUST00000121831 999 ntBASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm18187-201ENSMUST00000196476 984 ntBASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm8227-201ENSMUST00000223306 571 ntBASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Gm16372-201ENSMUST00000073088 450 ntBASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Map1b-203ENSMUST00000223725 2669 ntBASIC13.38□□□□□ -0.27
Trim43aQ3TL54 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms