Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Gm43547-201ENSMUST00000197729 328 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.24□□□□□ -0.61
Chd8Q09XV5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chd8Q09XV5 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm29543-201ENSMUST00000188138 967 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm18561-201ENSMUST00000206027 804 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm8384-201ENSMUST00000190905 704 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm43866-201ENSMUST00000203894 839 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm5449-201ENSMUST00000081132 357 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm12961-201ENSMUST00000120507 1050 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm6423-201ENSMUST00000204315 934 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.23□□□□□ -0.61
Chd8Q09XV5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Chd8Q09XV5 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Chd8Q09XV5 Mir432-201ENSMUST00000157230 75 ntBASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms