Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.91□□□□□ -0.66
Otx1P80205 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.91□□□□□ -0.66
Otx1P80205 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.91□□□□□ -0.66
Otx1P80205 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.91□□□□□ -0.66
Otx1P80205 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.91□□□□□ -0.66
Otx1P80205 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.91□□□□□ -0.66
Otx1P80205 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Otx1P80205 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Otx1P80205 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Otx1P80205 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Otx1P80205 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Otx1P80205 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Otx1P80205 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.9□□□□□ -0.66
Otx1P80205 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Otx1P80205 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Otx1P80205 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.9□□□□□ -0.66
Otx1P80205 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.9□□□□□ -0.66
Otx1P80205 Gm15198-201ENSMUST00000117283 177 ntBASIC10.9□□□□□ -0.66
Otx1P80205 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Otx1P80205 Gm11591-201ENSMUST00000120063 702 ntBASIC10.9□□□□□ -0.66
Otx1P80205 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.9□□□□□ -0.66
Otx1P80205 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Gm9630-201ENSMUST00000178304 885 ntBASIC10.9□□□□□ -0.66
Otx1P80205 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.9□□□□□ -0.66
Otx1P80205 Gm27572-201ENSMUST00000183702 255 ntBASIC10.9□□□□□ -0.66
Otx1P80205 Gm18584-201ENSMUST00000203098 964 ntBASIC10.9□□□□□ -0.66
Otx1P80205 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.9□□□□□ -0.66
Otx1P80205 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.9□□□□□ -0.66
Otx1P80205 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Otx1P80205 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Otx1P80205 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Otx1P80205 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Otx1P80205 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Otx1P80205 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Otx1P80205 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Otx1P80205 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Otx1P80205 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.9□□□□□ -0.67
Otx1P80205 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Otx1P80205 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Otx1P80205 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.89□□□□□ -0.67
Otx1P80205 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.89□□□□□ -0.67
Otx1P80205 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Gm23931-201ENSMUST00000103842 109 ntBASIC10.89□□□□□ -0.67
Otx1P80205 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.89□□□□□ -0.67
Otx1P80205 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Mir1247-201ENSMUST00000116706 82 ntBASIC10.89□□□□□ -0.67
Otx1P80205 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.89□□□□□ -0.67
Otx1P80205 Gm11964-201ENSMUST00000120982 444 ntBASIC10.89□□□□□ -0.67
Otx1P80205 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.89□□□□□ -0.67
Otx1P80205 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Otx1P80205 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Otx1P80205 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.89□□□□□ -0.67
Otx1P80205 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Otx1P80205 Olfr582-201ENSMUST00000098212 960 ntBASIC10.89□□□□□ -0.67
Otx1P80205 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Otx1P80205 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Otx1P80205 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms