Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Msx3P70354 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Msx3P70354 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.98□□□□□ -0.33
Msx3P70354 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Msx3P70354 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Msx3P70354 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.98□□□□□ -0.33
Msx3P70354 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Msx3P70354 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.98□□□□□ -0.33
Msx3P70354 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.98□□□□□ -0.33
Msx3P70354 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Msx3P70354 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.98□□□□□ -0.33
Msx3P70354 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.98□□□□□ -0.33
Msx3P70354 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.98□□□□□ -0.33
Msx3P70354 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.98□□□□□ -0.33
Msx3P70354 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.98□□□□□ -0.33
Msx3P70354 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Msx3P70354 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Msx3P70354 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Msx3P70354 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Msx3P70354 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.97□□□□□ -0.33
Msx3P70354 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Rmrp-201ENSMUST00000157463 271 ntBASIC12.97□□□□□ -0.33
Msx3P70354 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.97□□□□□ -0.33
Msx3P70354 Gm27682-201ENSMUST00000183930 110 ntBASIC12.97□□□□□ -0.33
Msx3P70354 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.97□□□□□ -0.33
Msx3P70354 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.97□□□□□ -0.33
Msx3P70354 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.97□□□□□ -0.33
Msx3P70354 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Msx3P70354 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.97□□□□□ -0.33
Msx3P70354 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Msx3P70354 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
Msx3P70354 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Msx3P70354 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.96□□□□□ -0.33
Msx3P70354 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.96□□□□□ -0.33
Msx3P70354 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Msx3P70354 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Msx3P70354 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.96□□□□□ -0.33
Msx3P70354 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Gm4984-201ENSMUST00000115987 360 ntBASIC12.96□□□□□ -0.33
Msx3P70354 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.96□□□□□ -0.33
Msx3P70354 Gm16177-201ENSMUST00000120728 718 ntBASIC12.96□□□□□ -0.33
Msx3P70354 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Gm1335-201ENSMUST00000121653 386 ntBASIC12.96□□□□□ -0.33
Msx3P70354 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.96□□□□□ -0.33
Msx3P70354 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.96□□□□□ -0.33
Msx3P70354 Gm43818-201ENSMUST00000200605 466 ntBASIC12.96□□□□□ -0.33
Msx3P70354 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.96□□□□□ -0.33
Msx3P70354 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.96□□□□□ -0.33
Msx3P70354 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Msx3P70354 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms