Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Gm13937-201ENSMUST00000121000 988 ntBASIC15.76■□□□□ 0.11
Vps33bP59016 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Gm3551-201ENSMUST00000190750 664 ntBASIC15.76■□□□□ 0.11
Vps33bP59016 Gm37458-201ENSMUST00000194055 410 ntBASIC15.76■□□□□ 0.11
Vps33bP59016 Gm42657-201ENSMUST00000201746 211 ntBASIC15.76■□□□□ 0.11
Vps33bP59016 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Gm25201-201ENSMUST00000083093 170 ntBASIC15.76■□□□□ 0.11
Vps33bP59016 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps33bP59016 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.76■□□□□ 0.11
Vps33bP59016 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Vps33bP59016 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps33bP59016 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps33bP59016 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps33bP59016 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Vps33bP59016 Gm23912-201ENSMUST00000104687 87 ntBASIC15.75■□□□□ 0.11
Vps33bP59016 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps33bP59016 Gm11801-201ENSMUST00000117807 746 ntBASIC15.75■□□□□ 0.11
Vps33bP59016 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Gm17877-201ENSMUST00000192578 814 ntBASIC15.75■□□□□ 0.11
Vps33bP59016 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Vps33bP59016 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.75■□□□□ 0.11
Vps33bP59016 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps33bP59016 AC121960.1-201ENSMUST00000227982 564 ntBASIC15.75■□□□□ 0.11
Vps33bP59016 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Vps33bP59016 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Gm8325-201ENSMUST00000099086 453 ntBASIC15.75■□□□□ 0.11
Vps33bP59016 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps33bP59016 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps33bP59016 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vps33bP59016 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Gm12164-201ENSMUST00000121695 551 ntBASIC15.74■□□□□ 0.11
Vps33bP59016 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.74■□□□□ 0.11
Vps33bP59016 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.74■□□□□ 0.11
Vps33bP59016 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.74■□□□□ 0.11
Vps33bP59016 Gm5714-201ENSMUST00000197343 566 ntBASIC15.74■□□□□ 0.11
Vps33bP59016 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps33bP59016 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 n-R5s211-201ENSMUST00000093689 119 ntBASIC15.74■□□□□ 0.11
Vps33bP59016 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Vps33bP59016 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vps33bP59016 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.74■□□□□ 0.11
Vps33bP59016 Gm13910-201ENSMUST00000121752 1428 ntBASIC15.74■□□□□ 0.11
Vps33bP59016 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.74■□□□□ 0.11
Vps33bP59016 Gm18198-201ENSMUST00000204986 1551 ntBASIC15.74■□□□□ 0.11
Vps33bP59016 AC154671.1-201ENSMUST00000228617 1578 ntBASIC15.74■□□□□ 0.11
Vps33bP59016 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps33bP59016 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.73■□□□□ 0.11
Vps33bP59016 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Vps33bP59016 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Vps33bP59016 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps33bP59016 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms