Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp1P56183 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.23□□□□□ -0.13
Rrp1P56183 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Rrp1P56183 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.23□□□□□ -0.13
Rrp1P56183 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Snord83b-201ENSMUST00000104546 94 ntBASIC14.23□□□□□ -0.13
Rrp1P56183 Gm12490-201ENSMUST00000120255 560 ntBASIC14.23□□□□□ -0.13
Rrp1P56183 Gm16479-201ENSMUST00000121706 932 ntBASIC14.23□□□□□ -0.13
Rrp1P56183 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Gm37042-201ENSMUST00000193816 581 ntBASIC14.23□□□□□ -0.13
Rrp1P56183 Ighv1-60-201ENSMUST00000195816 405 ntBASIC14.23□□□□□ -0.13
Rrp1P56183 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.23□□□□□ -0.13
Rrp1P56183 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.23□□□□□ -0.13
Rrp1P56183 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.23□□□□□ -0.13
Rrp1P56183 Gm9908-201ENSMUST00000211534 448 ntBASIC14.23□□□□□ -0.13
Rrp1P56183 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.23□□□□□ -0.13
Rrp1P56183 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
Rrp1P56183 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.23□□□□□ -0.13
Rrp1P56183 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rrp1P56183 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rrp1P56183 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rrp1P56183 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rrp1P56183 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.23□□□□□ -0.13
Rrp1P56183 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.22□□□□□ -0.13
Rrp1P56183 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Rrp1P56183 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.22□□□□□ -0.13
Rrp1P56183 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rrp1P56183 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.22□□□□□ -0.13
Rrp1P56183 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rrp1P56183 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rrp1P56183 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rrp1P56183 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rrp1P56183 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.22□□□□□ -0.13
Rrp1P56183 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.22□□□□□ -0.13
Rrp1P56183 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.22□□□□□ -0.13
Rrp1P56183 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.22□□□□□ -0.13
Rrp1P56183 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.22□□□□□ -0.13
Rrp1P56183 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Gm16296-201ENSMUST00000159905 325 ntBASIC14.22□□□□□ -0.13
Rrp1P56183 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
Rrp1P56183 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Gm37922-201ENSMUST00000195596 455 ntBASIC14.22□□□□□ -0.13
Rrp1P56183 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.22□□□□□ -0.13
Rrp1P56183 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.22□□□□□ -0.13
Rrp1P56183 Gm5186-201ENSMUST00000218781 920 ntBASIC14.22□□□□□ -0.13
Rrp1P56183 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.22□□□□□ -0.13
Rrp1P56183 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rrp1P56183 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.22□□□□□ -0.13
Rrp1P56183 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC14.22□□□□□ -0.13
Rrp1P56183 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rrp1P56183 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.21□□□□□ -0.13
Rrp1P56183 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Rrp1P56183 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rrp1P56183 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rrp1P56183 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rrp1P56183 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms