Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdh11P55288 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdh11P55288 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.54□□□□□ -0.56
Cdh11P55288 Gm13226-201ENSMUST00000117838 404 ntBASIC11.54□□□□□ -0.56
Cdh11P55288 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Mir1938-201ENSMUST00000158746 100 ntBASIC11.54□□□□□ -0.56
Cdh11P55288 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Gm38144-201ENSMUST00000192790 465 ntBASIC11.54□□□□□ -0.56
Cdh11P55288 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.54□□□□□ -0.56
Cdh11P55288 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Cdh11P55288 Gm7561-201ENSMUST00000211203 886 ntBASIC11.54□□□□□ -0.56
Cdh11P55288 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.54□□□□□ -0.56
Cdh11P55288 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.54□□□□□ -0.56
Cdh11P55288 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdh11P55288 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdh11P55288 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Cdh11P55288 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.53□□□□□ -0.56
Cdh11P55288 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Cdh11P55288 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdh11P55288 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Cdh11P55288 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdh11P55288 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.53□□□□□ -0.56
Cdh11P55288 Gm24644-201ENSMUST00000157114 139 ntBASIC11.53□□□□□ -0.56
Cdh11P55288 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.53□□□□□ -0.56
Cdh11P55288 Gm24196-201ENSMUST00000179161 110 ntBASIC11.53□□□□□ -0.56
Cdh11P55288 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdh11P55288 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Gm9899-201ENSMUST00000065519 555 ntBASIC11.53□□□□□ -0.56
Cdh11P55288 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdh11P55288 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdh11P55288 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Cdh11P55288 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdh11P55288 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdh11P55288 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdh11P55288 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms