Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.31□□□□□ -0.6
Abcd3P55096 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.31□□□□□ -0.6
Abcd3P55096 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Gm4984-201ENSMUST00000115987 360 ntBASIC11.31□□□□□ -0.6
Abcd3P55096 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.31□□□□□ -0.6
Abcd3P55096 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.31□□□□□ -0.6
Abcd3P55096 Gm1335-201ENSMUST00000121653 386 ntBASIC11.31□□□□□ -0.6
Abcd3P55096 Gm14760-201ENSMUST00000121831 999 ntBASIC11.31□□□□□ -0.6
Abcd3P55096 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Abcd3P55096 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.31□□□□□ -0.6
Abcd3P55096 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Gm8602-201ENSMUST00000184045 607 ntBASIC11.31□□□□□ -0.6
Abcd3P55096 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Abcd3P55096 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Abcd3P55096 Gm24526-201ENSMUST00000082921 158 ntBASIC11.31□□□□□ -0.6
Abcd3P55096 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Abcd3P55096 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.31□□□□□ -0.6
Abcd3P55096 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Abcd3P55096 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Abcd3P55096 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.3□□□□□ -0.6
Abcd3P55096 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Abcd3P55096 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Gm12390-201ENSMUST00000117897 397 ntBASIC11.3□□□□□ -0.6
Abcd3P55096 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.3□□□□□ -0.6
Abcd3P55096 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Abcd3P55096 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Abcd3P55096 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.3□□□□□ -0.6
Abcd3P55096 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.3□□□□□ -0.6
Abcd3P55096 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Abcd3P55096 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.3□□□□□ -0.6
Abcd3P55096 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.3□□□□□ -0.6
Abcd3P55096 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Abcd3P55096 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Abcd3P55096 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.3□□□□□ -0.6
Abcd3P55096 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.29□□□□□ -0.6
Abcd3P55096 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Abcd3P55096 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Abcd3P55096 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Abcd3P55096 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
Abcd3P55096 Gm13492-201ENSMUST00000119772 665 ntBASIC11.29□□□□□ -0.6
Abcd3P55096 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms