Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Lhx3P50481 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Lhx3P50481 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.78□□□□□ -0.36
Lhx3P50481 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.78□□□□□ -0.36
Lhx3P50481 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.78□□□□□ -0.36
Lhx3P50481 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.78□□□□□ -0.36
Lhx3P50481 Gm31256-201ENSMUST00000194705 506 ntBASIC12.78□□□□□ -0.36
Lhx3P50481 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.78□□□□□ -0.36
Lhx3P50481 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Gm24136-201ENSMUST00000083374 165 ntBASIC12.78□□□□□ -0.36
Lhx3P50481 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.78□□□□□ -0.36
Lhx3P50481 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.78□□□□□ -0.36
Lhx3P50481 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.78□□□□□ -0.36
Lhx3P50481 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Lhx3P50481 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx3P50481 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx3P50481 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx3P50481 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx3P50481 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx3P50481 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.77□□□□□ -0.36
Lhx3P50481 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx3P50481 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Lhx3P50481 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Gm14832-201ENSMUST00000121289 322 ntBASIC12.77□□□□□ -0.37
Lhx3P50481 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lhx3P50481 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.77□□□□□ -0.37
Lhx3P50481 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.77□□□□□ -0.37
Lhx3P50481 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Lhx3P50481 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.77□□□□□ -0.37
Lhx3P50481 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Lhx3P50481 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Lhx3P50481 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.77□□□□□ -0.37
Lhx3P50481 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lhx3P50481 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Lhx3P50481 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
Lhx3P50481 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lhx3P50481 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lhx3P50481 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lhx3P50481 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lhx3P50481 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Lhx3P50481 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lhx3P50481 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Gm9083-201ENSMUST00000120423 819 ntBASIC12.76□□□□□ -0.37
Lhx3P50481 Gm14381-201ENSMUST00000122105 414 ntBASIC12.76□□□□□ -0.37
Lhx3P50481 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.76□□□□□ -0.37
Lhx3P50481 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Gm28882-201ENSMUST00000185504 314 ntBASIC12.76□□□□□ -0.37
Lhx3P50481 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.76□□□□□ -0.37
Lhx3P50481 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.76□□□□□ -0.37
Lhx3P50481 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.76□□□□□ -0.37
Lhx3P50481 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Lhx3P50481 Gm8712-201ENSMUST00000221090 701 ntBASIC12.76□□□□□ -0.37
Lhx3P50481 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.76□□□□□ -0.37
Lhx3P50481 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lhx3P50481 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Lhx3P50481 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.75□□□□□ -0.37
Lhx3P50481 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms