Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Shmt1P50431 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.35□□□□□ -0.27
Shmt1P50431 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.35□□□□□ -0.27
Shmt1P50431 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Shmt1P50431 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Shmt1P50431 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Shmt1P50431 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Shmt1P50431 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Shmt1P50431 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Shmt1P50431 Gm14381-201ENSMUST00000122105 414 ntBASIC13.34□□□□□ -0.27
Shmt1P50431 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Gm27320-201ENSMUST00000184892 109 ntBASIC13.34□□□□□ -0.27
Shmt1P50431 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.34□□□□□ -0.27
Shmt1P50431 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.34□□□□□ -0.27
Shmt1P50431 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.34□□□□□ -0.27
Shmt1P50431 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.34□□□□□ -0.27
Shmt1P50431 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Shmt1P50431 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shmt1P50431 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shmt1P50431 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Shmt1P50431 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.33□□□□□ -0.27
Shmt1P50431 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shmt1P50431 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Shmt1P50431 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shmt1P50431 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Gm11222-201ENSMUST00000119005 738 ntBASIC13.33□□□□□ -0.28
Shmt1P50431 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.33□□□□□ -0.28
Shmt1P50431 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Gm17376-201ENSMUST00000166016 84 ntBASIC13.33□□□□□ -0.28
Shmt1P50431 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.33□□□□□ -0.28
Shmt1P50431 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Shmt1P50431 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Shmt1P50431 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Shmt1P50431 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Shmt1P50431 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shmt1P50431 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms