Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ptx3P48759 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ptx3P48759 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.79□□□□□ -0.52
Ptx3P48759 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Ptx3P48759 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ptx3P48759 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.79□□□□□ -0.52
Ptx3P48759 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.79□□□□□ -0.52
Ptx3P48759 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ptx3P48759 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.79□□□□□ -0.52
Ptx3P48759 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.79□□□□□ -0.52
Ptx3P48759 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.79□□□□□ -0.52
Ptx3P48759 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.79□□□□□ -0.52
Ptx3P48759 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ptx3P48759 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ptx3P48759 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.79□□□□□ -0.52
Ptx3P48759 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Ptx3P48759 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Ptx3P48759 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ptx3P48759 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.78□□□□□ -0.52
Ptx3P48759 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Gm14726-201ENSMUST00000120623 896 ntBASIC11.78□□□□□ -0.52
Ptx3P48759 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.78□□□□□ -0.52
Ptx3P48759 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Gm20482-202ENSMUST00000174729 825 ntBASIC11.78□□□□□ -0.52
Ptx3P48759 Gm27243-201ENSMUST00000183964 521 ntBASIC11.78□□□□□ -0.52
Ptx3P48759 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Gm45925-201ENSMUST00000218882 744 ntBASIC11.78□□□□□ -0.52
Ptx3P48759 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ptx3P48759 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Daam2-202ENSMUST00000224595 1926 ntBASIC11.78□□□□□ -0.52
Ptx3P48759 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.78□□□□□ -0.52
Ptx3P48759 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.78□□□□□ -0.52
Ptx3P48759 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ptx3P48759 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ptx3P48759 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms