Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm14719-201ENSMUST00000121891 340 ntBASIC12.15□□□□□ -0.46
Prox1P48437 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.15□□□□□ -0.46
Prox1P48437 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.15□□□□□ -0.46
Prox1P48437 Gm26315-201ENSMUST00000083890 321 ntBASIC12.15□□□□□ -0.46
Prox1P48437 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.15□□□□□ -0.46
Prox1P48437 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Prox1P48437 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.15□□□□□ -0.46
Prox1P48437 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prox1P48437 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Prox1P48437 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.14□□□□□ -0.47
Prox1P48437 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.14□□□□□ -0.47
Prox1P48437 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.14□□□□□ -0.47
Prox1P48437 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.14□□□□□ -0.47
Prox1P48437 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.14□□□□□ -0.47
Prox1P48437 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Gm2423-201ENSMUST00000074863 733 ntBASIC12.14□□□□□ -0.47
Prox1P48437 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.14□□□□□ -0.47
Prox1P48437 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Prox1P48437 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prox1P48437 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Prox1P48437 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Prox1P48437 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.13□□□□□ -0.47
Prox1P48437 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Prox1P48437 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Prox1P48437 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Prox1P48437 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.13□□□□□ -0.47
Prox1P48437 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Prox1P48437 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Prox1P48437 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.13□□□□□ -0.47
Prox1P48437 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Prox1P48437 Gm6447-201ENSMUST00000118905 835 ntBASIC12.13□□□□□ -0.47
Prox1P48437 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.13□□□□□ -0.47
Prox1P48437 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.13□□□□□ -0.47
Prox1P48437 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.13□□□□□ -0.47
Prox1P48437 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms