Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.36□□□□□ -0.43
Gli1P47806 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gli1P47806 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gli1P47806 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.35□□□□□ -0.43
Gli1P47806 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.35□□□□□ -0.43
Gli1P47806 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.35□□□□□ -0.43
Gli1P47806 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.35□□□□□ -0.43
Gli1P47806 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Gm5187-201ENSMUST00000117317 991 ntBASIC12.35□□□□□ -0.43
Gli1P47806 Gm13612-201ENSMUST00000119276 390 ntBASIC12.35□□□□□ -0.43
Gli1P47806 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.35□□□□□ -0.43
Gli1P47806 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.35□□□□□ -0.43
Gli1P47806 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.35□□□□□ -0.43
Gli1P47806 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.35□□□□□ -0.43
Gli1P47806 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.35□□□□□ -0.43
Gli1P47806 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.35□□□□□ -0.43
Gli1P47806 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.35□□□□□ -0.43
Gli1P47806 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.35□□□□□ -0.43
Gli1P47806 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gli1P47806 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gli1P47806 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.34□□□□□ -0.43
Gli1P47806 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Gli1P47806 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gli1P47806 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.34□□□□□ -0.43
Gli1P47806 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.34□□□□□ -0.43
Gli1P47806 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gli1P47806 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Gli1P47806 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.34□□□□□ -0.43
Gli1P47806 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.34□□□□□ -0.43
Gli1P47806 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Gli1P47806 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Gm6013-201ENSMUST00000212264 699 ntBASIC12.34□□□□□ -0.43
Gli1P47806 Gm45880-201ENSMUST00000213041 853 ntBASIC12.34□□□□□ -0.43
Gli1P47806 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.34□□□□□ -0.43
Gli1P47806 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.34□□□□□ -0.43
Gli1P47806 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.34□□□□□ -0.43
Gli1P47806 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.34□□□□□ -0.43
Gli1P47806 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Gm10012-201ENSMUST00000078252 192 ntBASIC12.34□□□□□ -0.43
Gli1P47806 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gli1P47806 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.33□□□□□ -0.43
Gli1P47806 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Gli1P47806 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Gli1P47806 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Gli1P47806 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Gli1P47806 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Gli1P47806 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gli1P47806 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.33□□□□□ -0.44
Gli1P47806 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms