Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.97□□□□□ -0.49
Nkx2-6P43688 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx2-6P43688 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-6P43688 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.96□□□□□ -0.49
Nkx2-6P43688 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gm16505-201ENSMUST00000179981 232 ntBASIC11.96□□□□□ -0.49
Nkx2-6P43688 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gm44405-201ENSMUST00000198952 126 ntBASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gm44967-201ENSMUST00000207047 631 ntBASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.96□□□□□ -0.49
Nkx2-6P43688 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-6P43688 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-6P43688 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-6P43688 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-6P43688 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.95□□□□□ -0.5
Nkx2-6P43688 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.95□□□□□ -0.5
Nkx2-6P43688 Gm4909-201ENSMUST00000118749 794 ntBASIC11.95□□□□□ -0.5
Nkx2-6P43688 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Gm25043-201ENSMUST00000158604 212 ntBASIC11.95□□□□□ -0.5
Nkx2-6P43688 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-6P43688 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Nkx2-6P43688 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms