Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cdx2P43241 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Gm15703-201ENSMUST00000120250 880 ntBASIC11.98□□□□□ -0.49
Cdx2P43241 Gm14665-201ENSMUST00000122294 557 ntBASIC11.98□□□□□ -0.49
Cdx2P43241 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdx2P43241 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdx2P43241 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Gm9996-201ENSMUST00000070359 913 ntBASIC11.98□□□□□ -0.49
Cdx2P43241 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdx2P43241 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdx2P43241 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdx2P43241 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdx2P43241 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.97□□□□□ -0.49
Cdx2P43241 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.97□□□□□ -0.49
Cdx2P43241 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdx2P43241 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.97□□□□□ -0.49
Cdx2P43241 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdx2P43241 Gm14058-201ENSMUST00000116082 735 ntBASIC11.97□□□□□ -0.49
Cdx2P43241 Gm12165-201ENSMUST00000117047 342 ntBASIC11.97□□□□□ -0.49
Cdx2P43241 Gm13045-201ENSMUST00000119019 712 ntBASIC11.97□□□□□ -0.49
Cdx2P43241 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdx2P43241 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdx2P43241 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.97□□□□□ -0.49
Cdx2P43241 Gm44545-201ENSMUST00000208262 746 ntBASIC11.97□□□□□ -0.49
Cdx2P43241 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Cdx2P43241 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Cdx2P43241 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.97□□□□□ -0.49
Cdx2P43241 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdx2P43241 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdx2P43241 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.96□□□□□ -0.49
Cdx2P43241 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Cdx2P43241 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdx2P43241 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Cdx2P43241 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.96□□□□□ -0.49
Cdx2P43241 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.96□□□□□ -0.49
Cdx2P43241 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Cdx2P43241 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.96□□□□□ -0.49
Cdx2P43241 Gm18304-201ENSMUST00000189162 546 ntBASIC11.96□□□□□ -0.49
Cdx2P43241 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.96□□□□□ -0.49
Cdx2P43241 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.96□□□□□ -0.49
Cdx2P43241 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.96□□□□□ -0.49
Cdx2P43241 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdx2P43241 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdx2P43241 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms