Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm37921-201ENSMUST00000194333 695 ntBASIC13.03□□□□□ -0.32
HttP42859 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Gm2448-201ENSMUST00000207080 559 ntBASIC13.03□□□□□ -0.32
HttP42859 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.03□□□□□ -0.32
HttP42859 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.03□□□□□ -0.32
HttP42859 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HttP42859 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.03□□□□□ -0.32
HttP42859 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HttP42859 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HttP42859 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.02□□□□□ -0.32
HttP42859 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HttP42859 Gm14270-201ENSMUST00000118388 846 ntBASIC13.02□□□□□ -0.32
HttP42859 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HttP42859 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.02□□□□□ -0.32
HttP42859 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.02□□□□□ -0.32
HttP42859 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.02□□□□□ -0.32
HttP42859 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.02□□□□□ -0.32
HttP42859 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HttP42859 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
HttP42859 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HttP42859 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
HttP42859 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.02□□□□□ -0.32
HttP42859 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HttP42859 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HttP42859 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
HttP42859 Gm23612-201ENSMUST00000103823 110 ntBASIC13.02□□□□□ -0.33
HttP42859 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC13.02□□□□□ -0.33
HttP42859 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Gm23576-201ENSMUST00000179918 110 ntBASIC13.02□□□□□ -0.33
HttP42859 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.02□□□□□ -0.33
HttP42859 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 AC121357.1-201ENSMUST00000227365 608 ntBASIC13.02□□□□□ -0.33
HttP42859 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HttP42859 Gm24943-201ENSMUST00000158329 433 ntBASIC13.02□□□□□ -0.33
HttP42859 Gm38007-201ENSMUST00000192187 313 ntBASIC13.02□□□□□ -0.33
HttP42859 Gm38151-201ENSMUST00000195085 289 ntBASIC13.02□□□□□ -0.33
HttP42859 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.02□□□□□ -0.33
HttP42859 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
HttP42859 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.02□□□□□ -0.33
HttP42859 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Gm21358-201ENSMUST00000191645 1659 ntBASIC13.01□□□□□ -0.33
HttP42859 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Gm23604-201ENSMUST00000104311 132 ntBASIC13.01□□□□□ -0.33
HttP42859 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.01□□□□□ -0.33
HttP42859 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.01□□□□□ -0.33
HttP42859 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Gm4868-201ENSMUST00000164138 789 ntBASIC13.01□□□□□ -0.33
HttP42859 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.01□□□□□ -0.33
HttP42859 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.01□□□□□ -0.33
HttP42859 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.01□□□□□ -0.33
HttP42859 Gm9204-201ENSMUST00000212641 947 ntBASIC13.01□□□□□ -0.33
HttP42859 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HttP42859 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.01□□□□□ -0.33
HttP42859 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
HttP42859 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
HttP42859 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HttP42859 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HttP42859 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Gm11957-201ENSMUST00000118304 779 ntBASIC13.01□□□□□ -0.33
HttP42859 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
HttP42859 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
HttP42859 Gm10263-201ENSMUST00000085163 300 ntBASIC13.01□□□□□ -0.33
HttP42859 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.01□□□□□ -0.33
HttP42859 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
HttP42859 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HttP42859 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms