Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm13736-201ENSMUST00000119272 253 ntBASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm11597-201ENSMUST00000121423 964 ntBASIC11.57□□□□□ -0.56
Nkx2-2P42586 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm19184-201ENSMUST00000196798 928 ntBASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.57□□□□□ -0.56
Nkx2-2P42586 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-2P42586 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.56□□□□□ -0.56
Nkx2-2P42586 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.56□□□□□ -0.56
Nkx2-2P42586 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.56□□□□□ -0.56
Nkx2-2P42586 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 AY702102-202ENSMUST00000194651 1173 ntBASIC11.56□□□□□ -0.56
Nkx2-2P42586 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Gm19309-201ENSMUST00000218295 205 ntBASIC11.56□□□□□ -0.56
Nkx2-2P42586 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.56□□□□□ -0.56
Nkx2-2P42586 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.56□□□□□ -0.56
Nkx2-2P42586 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Nkx2-2P42586 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Mir1247-201ENSMUST00000116706 82 ntBASIC11.55□□□□□ -0.56
Nkx2-2P42586 Gm12314-201ENSMUST00000118104 538 ntBASIC11.55□□□□□ -0.56
Nkx2-2P42586 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.55□□□□□ -0.56
Nkx2-2P42586 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.55□□□□□ -0.56
Nkx2-2P42586 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms