Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm12857-201ENSMUST00000117678 592 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 Gm13182-201ENSMUST00000122241 312 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 Gm22144-201ENSMUST00000157402 102 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.95□□□□□ -0.34
Cxcl12P40224 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.95□□□□□ -0.34
Cxcl12P40224 Gm4157-201ENSMUST00000211647 679 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.95□□□□□ -0.34
Cxcl12P40224 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.95□□□□□ -0.34
Cxcl12P40224 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cxcl12P40224 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.95□□□□□ -0.34
Cxcl12P40224 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cxcl12P40224 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl12P40224 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl12P40224 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.94□□□□□ -0.34
Cxcl12P40224 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Cxcl12P40224 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm11956-201ENSMUST00000119525 512 ntBASIC12.94□□□□□ -0.34
Cxcl12P40224 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.94□□□□□ -0.34
Cxcl12P40224 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.94□□□□□ -0.34
Cxcl12P40224 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm18304-201ENSMUST00000189162 546 ntBASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.94□□□□□ -0.34
Cxcl12P40224 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm19091-201ENSMUST00000208120 978 ntBASIC12.94□□□□□ -0.34
Cxcl12P40224 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.94□□□□□ -0.34
Cxcl12P40224 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cxcl12P40224 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cxcl12P40224 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.93□□□□□ -0.34
Cxcl12P40224 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.93□□□□□ -0.34
Cxcl12P40224 Gm24934-201ENSMUST00000103764 111 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms