Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.39□□□□□ -0.75
Timp3P39876 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Timp3P39876 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.39□□□□□ -0.75
Timp3P39876 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.39□□□□□ -0.75
Timp3P39876 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.39□□□□□ -0.75
Timp3P39876 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.39□□□□□ -0.75
Timp3P39876 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Timp3P39876 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.39□□□□□ -0.75
Timp3P39876 Gm7783-201ENSMUST00000204795 781 ntBASIC10.39□□□□□ -0.75
Timp3P39876 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Timp3P39876 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.39□□□□□ -0.75
Timp3P39876 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.39□□□□□ -0.75
Timp3P39876 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Timp3P39876 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Timp3P39876 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Timp3P39876 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Timp3P39876 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.38□□□□□ -0.75
Timp3P39876 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Timp3P39876 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.38□□□□□ -0.75
Timp3P39876 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.38□□□□□ -0.75
Timp3P39876 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.38□□□□□ -0.75
Timp3P39876 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.38□□□□□ -0.75
Timp3P39876 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.38□□□□□ -0.75
Timp3P39876 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.38□□□□□ -0.75
Timp3P39876 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.38□□□□□ -0.75
Timp3P39876 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.38□□□□□ -0.75
Timp3P39876 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.38□□□□□ -0.75
Timp3P39876 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.38□□□□□ -0.75
Timp3P39876 Gm24548-201ENSMUST00000158650 108 ntBASIC10.38□□□□□ -0.75
Timp3P39876 Mospd4-201ENSMUST00000180618 576 ntBASIC10.38□□□□□ -0.75
Timp3P39876 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.38□□□□□ -0.75
Timp3P39876 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Timp3P39876 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.38□□□□□ -0.75
Timp3P39876 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.38□□□□□ -0.75
Timp3P39876 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.38□□□□□ -0.75
Timp3P39876 Gm45930-201ENSMUST00000221330 292 ntBASIC10.38□□□□□ -0.75
Timp3P39876 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.38□□□□□ -0.75
Timp3P39876 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Timp3P39876 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Timp3P39876 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Timp3P39876 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms