Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Rom1P32958 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rom1P32958 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rom1P32958 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rom1P32958 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rom1P32958 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rom1P32958 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Rom1P32958 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rom1P32958 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Rom1P32958 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.99□□□□□ -0.81
Rom1P32958 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Rom1P32958 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.98□□□□□ -0.81
Rom1P32958 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.98□□□□□ -0.81
Rom1P32958 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Rom1P32958 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Rom1P32958 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Gm4875-201ENSMUST00000118257 786 ntBASIC9.98□□□□□ -0.81
Rom1P32958 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC9.98□□□□□ -0.81
Rom1P32958 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.98□□□□□ -0.81
Rom1P32958 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Rom1P32958 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Gm6263-201ENSMUST00000120029 1342 ntBASIC9.98□□□□□ -0.81
Rom1P32958 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Rom1P32958 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
Rom1P32958 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Rom1P32958 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Rom1P32958 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Rom1P32958 Cog3-203ENSMUST00000227473 4197 ntBASIC9.97□□□□□ -0.81
Rom1P32958 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.97□□□□□ -0.81
Rom1P32958 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Rom1P32958 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Rom1P32958 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.97□□□□□ -0.81
Rom1P32958 Gm15376-201ENSMUST00000122258 783 ntBASIC9.97□□□□□ -0.81
Rom1P32958 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC9.97□□□□□ -0.81
Rom1P32958 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Gm16372-201ENSMUST00000073088 450 ntBASIC9.97□□□□□ -0.81
Rom1P32958 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC9.97□□□□□ -0.81
Rom1P32958 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.97□□□□□ -0.81
Rom1P32958 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC9.97□□□□□ -0.81
Rom1P32958 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.97□□□□□ -0.81
Rom1P32958 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Rom1P32958 Map1b-203ENSMUST00000223725 2669 ntBASIC9.97□□□□□ -0.81
Rom1P32958 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Rom1P32958 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Rom1P32958 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Rom1P32958 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC9.96□□□□□ -0.82
Rom1P32958 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms