Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.63□□□□□ -0.55
Nedd8P29595 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Nedd8P29595 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Nedd8P29595 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Rprl2-201ENSMUST00000157150 290 ntBASIC11.63□□□□□ -0.55
Nedd8P29595 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.63□□□□□ -0.55
Nedd8P29595 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nedd8P29595 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.63□□□□□ -0.55
Nedd8P29595 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.63□□□□□ -0.55
Nedd8P29595 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Nedd8P29595 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.63□□□□□ -0.55
Nedd8P29595 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Nedd8P29595 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.63□□□□□ -0.55
Nedd8P29595 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.63□□□□□ -0.55
Nedd8P29595 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Nedd8P29595 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Nedd8P29595 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nedd8P29595 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Nedd8P29595 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Nedd8P29595 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.62□□□□□ -0.55
Nedd8P29595 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Nedd8P29595 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.62□□□□□ -0.55
Nedd8P29595 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.62□□□□□ -0.55
Nedd8P29595 Gm45612-201ENSMUST00000211320 160 ntBASIC11.62□□□□□ -0.55
Nedd8P29595 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC11.62□□□□□ -0.55
Nedd8P29595 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.62□□□□□ -0.55
Nedd8P29595 Gm9229-201ENSMUST00000222777 126 ntBASIC11.62□□□□□ -0.55
Nedd8P29595 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.62□□□□□ -0.55
Nedd8P29595 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.62□□□□□ -0.55
Nedd8P29595 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Nedd8P29595 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.62□□□□□ -0.55
Nedd8P29595 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Nedd8P29595 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.61□□□□□ -0.55
Nedd8P29595 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.61□□□□□ -0.55
Nedd8P29595 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Nedd8P29595 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.61□□□□□ -0.55
Nedd8P29595 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Nedd8P29595 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms