Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.96□□□□□ -0.49
ApoeP08226 Gm14921-201ENSMUST00000118643 908 ntBASIC11.96□□□□□ -0.49
ApoeP08226 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.96□□□□□ -0.49
ApoeP08226 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.96□□□□□ -0.49
ApoeP08226 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.96□□□□□ -0.49
ApoeP08226 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.96□□□□□ -0.49
ApoeP08226 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.96□□□□□ -0.49
ApoeP08226 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.96□□□□□ -0.49
ApoeP08226 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.96□□□□□ -0.49
ApoeP08226 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
ApoeP08226 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
ApoeP08226 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
ApoeP08226 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ApoeP08226 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ApoeP08226 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
ApoeP08226 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
ApoeP08226 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
ApoeP08226 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ApoeP08226 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
ApoeP08226 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ApoeP08226 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.95□□□□□ -0.5
ApoeP08226 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
ApoeP08226 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.95□□□□□ -0.5
ApoeP08226 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
ApoeP08226 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.95□□□□□ -0.5
ApoeP08226 Gm26308-201ENSMUST00000157768 69 ntBASIC11.95□□□□□ -0.5
ApoeP08226 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.95□□□□□ -0.5
ApoeP08226 Gm27838-201ENSMUST00000184829 128 ntBASIC11.95□□□□□ -0.5
ApoeP08226 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.95□□□□□ -0.5
ApoeP08226 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.95□□□□□ -0.5
ApoeP08226 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
ApoeP08226 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
ApoeP08226 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.94□□□□□ -0.5
ApoeP08226 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.94□□□□□ -0.5
ApoeP08226 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Gm28693-202ENSMUST00000190758 331 ntBASIC11.94□□□□□ -0.5
ApoeP08226 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.94□□□□□ -0.5
ApoeP08226 Gm44397-201ENSMUST00000195950 113 ntBASIC11.94□□□□□ -0.5
ApoeP08226 Gm6983-201ENSMUST00000214912 628 ntBASIC11.94□□□□□ -0.5
ApoeP08226 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.94□□□□□ -0.5
ApoeP08226 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
ApoeP08226 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.94□□□□□ -0.5
ApoeP08226 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.94□□□□□ -0.5
ApoeP08226 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ApoeP08226 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms