Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.91□□□□□ -0.02
Col3a1P08121 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.91□□□□□ -0.02
Col3a1P08121 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.91□□□□□ -0.02
Col3a1P08121 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col3a1P08121 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
Col3a1P08121 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Col3a1P08121 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.91□□□□□ -0.02
Col3a1P08121 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.91□□□□□ -0.02
Col3a1P08121 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.91□□□□□ -0.02
Col3a1P08121 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col3a1P08121 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.91□□□□□ -0.02
Col3a1P08121 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Gm14247-201ENSMUST00000120950 237 ntBASIC14.9□□□□□ -0.02
Col3a1P08121 Gm12164-201ENSMUST00000121695 551 ntBASIC14.9□□□□□ -0.02
Col3a1P08121 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.9□□□□□ -0.02
Col3a1P08121 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Gm28071-201ENSMUST00000190355 478 ntBASIC14.9□□□□□ -0.02
Col3a1P08121 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.9□□□□□ -0.02
Col3a1P08121 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.9□□□□□ -0.02
Col3a1P08121 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.9□□□□□ -0.02
Col3a1P08121 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Col3a1P08121 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.9□□□□□ -0.02
Col3a1P08121 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Col3a1P08121 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Gm6506-201ENSMUST00000119775 1136 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.89□□□□□ -0.03
Col3a1P08121 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.89□□□□□ -0.03
Col3a1P08121 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 Gm27530-201ENSMUST00000184096 98 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col3a1P08121 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 Rprl1-201ENSMUST00000158050 327 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Gm8343-201ENSMUST00000182705 994 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 Gm44882-201ENSMUST00000205702 802 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.89□□□□□ -0.03
Col3a1P08121 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Col3a1P08121 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col3a1P08121 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC14.89□□□□□ -0.03
Col3a1P08121 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col3a1P08121 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Col3a1P08121 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms