Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm27390-201ENSMUST00000184516 176 ntBASIC11.67□□□□□ -0.54
Cops4O88544 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.67□□□□□ -0.54
Cops4O88544 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.67□□□□□ -0.54
Cops4O88544 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cops4O88544 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cops4O88544 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Cops4O88544 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cops4O88544 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cops4O88544 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.67□□□□□ -0.54
Cops4O88544 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cops4O88544 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.67□□□□□ -0.54
Cops4O88544 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Map1b-203ENSMUST00000223725 2669 ntBASIC11.66□□□□□ -0.54
Cops4O88544 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cops4O88544 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.66□□□□□ -0.54
Cops4O88544 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.66□□□□□ -0.54
Cops4O88544 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.66□□□□□ -0.54
Cops4O88544 Gm7063-201ENSMUST00000186840 981 ntBASIC11.66□□□□□ -0.54
Cops4O88544 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cops4O88544 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.66□□□□□ -0.54
Cops4O88544 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.66□□□□□ -0.54
Cops4O88544 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cops4O88544 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.66□□□□□ -0.54
Cops4O88544 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cops4O88544 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cops4O88544 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.65□□□□□ -0.54
Cops4O88544 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.65□□□□□ -0.54
Cops4O88544 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Gm6447-201ENSMUST00000118905 835 ntBASIC11.65□□□□□ -0.54
Cops4O88544 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.65□□□□□ -0.54
Cops4O88544 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.65□□□□□ -0.54
Cops4O88544 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.65□□□□□ -0.54
Cops4O88544 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.65□□□□□ -0.54
Cops4O88544 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.65□□□□□ -0.54
Cops4O88544 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.65□□□□□ -0.54
Cops4O88544 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cops4O88544 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cops4O88544 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cops4O88544 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms