Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Rmrp-201ENSMUST00000157463 271 ntBASIC13.39□□□□□ -0.27
Itgb3O54890 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Itgb3O54890 Gm31256-201ENSMUST00000194705 506 ntBASIC13.39□□□□□ -0.27
Itgb3O54890 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.39□□□□□ -0.27
Itgb3O54890 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.39□□□□□ -0.27
Itgb3O54890 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.39□□□□□ -0.27
Itgb3O54890 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.39□□□□□ -0.27
Itgb3O54890 Gm9257-201ENSMUST00000221254 232 ntBASIC13.39□□□□□ -0.27
Itgb3O54890 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.39□□□□□ -0.27
Itgb3O54890 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.39□□□□□ -0.27
Itgb3O54890 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.39□□□□□ -0.27
Itgb3O54890 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Itgb3O54890 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.38□□□□□ -0.27
Itgb3O54890 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Gm23270-201ENSMUST00000104055 131 ntBASIC13.38□□□□□ -0.27
Itgb3O54890 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Itgb3O54890 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Itgb3O54890 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Itgb3O54890 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Gm26083-201ENSMUST00000157904 193 ntBASIC13.38□□□□□ -0.27
Itgb3O54890 Gm17376-201ENSMUST00000166016 84 ntBASIC13.38□□□□□ -0.27
Itgb3O54890 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC13.38□□□□□ -0.27
Itgb3O54890 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.38□□□□□ -0.27
Itgb3O54890 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Itgb3O54890 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.38□□□□□ -0.27
Itgb3O54890 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.38□□□□□ -0.27
Itgb3O54890 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Itgb3O54890 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.38□□□□□ -0.27
Itgb3O54890 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.37□□□□□ -0.27
Itgb3O54890 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.37□□□□□ -0.27
Itgb3O54890 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm14999-201ENSMUST00000121039 624 ntBASIC13.37□□□□□ -0.27
Itgb3O54890 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.37□□□□□ -0.27
Itgb3O54890 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.37□□□□□ -0.27
Itgb3O54890 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm39404-201ENSMUST00000216350 313 ntBASIC13.37□□□□□ -0.27
Itgb3O54890 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.37□□□□□ -0.27
Itgb3O54890 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.37□□□□□ -0.27
Itgb3O54890 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Itgb3O54890 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.37□□□□□ -0.27
Itgb3O54890 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Itgb3O54890 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Itgb3O54890 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.37□□□□□ -0.27
Itgb3O54890 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Itgb3O54890 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.36□□□□□ -0.27
Itgb3O54890 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.36□□□□□ -0.27
Itgb3O54890 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Itgb3O54890 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms