Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Limk2O54785 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.84□□□□□ -0.35
Limk2O54785 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Limk2O54785 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Limk2O54785 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Limk2O54785 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Limk2O54785 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Limk2O54785 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Limk2O54785 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Limk2O54785 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.83□□□□□ -0.36
Limk2O54785 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Limk2O54785 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Limk2O54785 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.83□□□□□ -0.36
Limk2O54785 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.83□□□□□ -0.36
Limk2O54785 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Mir5132-201ENSMUST00000175166 71 ntBASIC12.83□□□□□ -0.36
Limk2O54785 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.83□□□□□ -0.36
Limk2O54785 Gm5781-201ENSMUST00000219792 443 ntBASIC12.83□□□□□ -0.36
Limk2O54785 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Limk2O54785 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Limk2O54785 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Limk2O54785 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.82□□□□□ -0.36
Limk2O54785 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Limk2O54785 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Limk2O54785 Gm12502-201ENSMUST00000120197 444 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.82□□□□□ -0.36
Limk2O54785 Gm24548-201ENSMUST00000158650 108 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Gm8738-201ENSMUST00000172606 329 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Gm2383-201ENSMUST00000181461 807 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Limk2O54785 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Limk2O54785 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Gm26035-201ENSMUST00000083065 308 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Limk2O54785 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Limk2O54785 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.82□□□□□ -0.36
Limk2O54785 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Limk2O54785 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Limk2O54785 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.81□□□□□ -0.36
Limk2O54785 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.81□□□□□ -0.36
Limk2O54785 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Limk2O54785 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Gm11964-201ENSMUST00000120982 444 ntBASIC12.81□□□□□ -0.36
Limk2O54785 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.81□□□□□ -0.36
Limk2O54785 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Limk2O54785 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.81□□□□□ -0.36
Limk2O54785 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Limk2O54785 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Limk2O54785 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Limk2O54785 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.81□□□□□ -0.36
Limk2O54785 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms