Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.15□□□□□ -0.3
Ebf3O08791 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Ebf3O08791 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Ebf3O08791 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ebf3O08791 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ebf3O08791 Gm25214-201ENSMUST00000104573 129 ntBASIC13.15□□□□□ -0.3
Ebf3O08791 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.15□□□□□ -0.3
Ebf3O08791 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Gm45186-201ENSMUST00000206874 478 ntBASIC13.15□□□□□ -0.3
Ebf3O08791 Gm44967-201ENSMUST00000207047 631 ntBASIC13.15□□□□□ -0.3
Ebf3O08791 Gm5950-201ENSMUST00000213337 772 ntBASIC13.15□□□□□ -0.3
Ebf3O08791 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.15□□□□□ -0.3
Ebf3O08791 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ebf3O08791 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Ebf3O08791 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ebf3O08791 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.14□□□□□ -0.31
Ebf3O08791 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.14□□□□□ -0.31
Ebf3O08791 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.14□□□□□ -0.31
Ebf3O08791 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 Gm24990-201ENSMUST00000157406 323 ntBASIC13.14□□□□□ -0.31
Ebf3O08791 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.14□□□□□ -0.31
Ebf3O08791 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.14□□□□□ -0.31
Ebf3O08791 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.14□□□□□ -0.31
Ebf3O08791 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ebf3O08791 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ebf3O08791 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ebf3O08791 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ebf3O08791 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.13□□□□□ -0.31
Ebf3O08791 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.13□□□□□ -0.31
Ebf3O08791 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.13□□□□□ -0.31
Ebf3O08791 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.13□□□□□ -0.31
Ebf3O08791 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ebf3O08791 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms