Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Gm10553J3QPF1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm10553J3QPF1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm10553J3QPF1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Gm10553J3QPF1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm13492-201ENSMUST00000119772 665 ntBASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm29396-201ENSMUST00000185659 716 ntBASIC9.65□□□□□ -0.86
Gm10553J3QPF1 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Olfr284-202ENSMUST00000206647 966 ntBASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.65□□□□□ -0.86
Gm10553J3QPF1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 Gm43045-201ENSMUST00000198725 2095 ntBASIC9.65□□□□□ -0.87
Gm10553J3QPF1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Gm10553J3QPF1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm15198-201ENSMUST00000117283 177 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm13316-201ENSMUST00000140537 691 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm24548-201ENSMUST00000158650 108 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Mospd4-201ENSMUST00000180618 576 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm37489-201ENSMUST00000191883 159 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm6334-201ENSMUST00000207083 228 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.64□□□□□ -0.87
Gm10553J3QPF1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.64□□□□□ -0.87
Gm10553J3QPF1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms