Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 Gm22144-201ENSMUST00000157402 102 ntBASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 Gm6397-201ENSMUST00000161973 1069 ntBASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 Gm17831-201ENSMUST00000205579 900 ntBASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 Gm9463-201ENSMUST00000206707 601 ntBASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 CT485607.1-201ENSMUST00000216100 85 ntBASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 Gm7551-201ENSMUST00000089593 1074 ntBASIC22.68■■□□□ 1.22
Ccdc180J3QNE4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Gm4735-201ENSMUST00000138679 1302 ntBASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Gm5855-201ENSMUST00000200240 1305 ntBASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Gm11628-201ENSMUST00000117568 171 ntBASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Gm14460-201ENSMUST00000121511 639 ntBASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Gm10288-201ENSMUST00000084614 537 ntBASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ccdc180J3QNE4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Gm9947-201ENSMUST00000067599 2920 ntBASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Gm8956-201ENSMUST00000203939 825 ntBASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 AC169036.1-201ENSMUST00000227994 296 ntBASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC22.66■■□□□ 1.22
Ccdc180J3QNE4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm16166-201ENSMUST00000118291 787 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm13263-201ENSMUST00000121271 838 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm26448-201ENSMUST00000082446 203 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm45003-201ENSMUST00000205875 2158 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Rprl1-201ENSMUST00000158050 327 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm5733-201ENSMUST00000190232 939 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm18711-201ENSMUST00000199341 750 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm19287-201ENSMUST00000203190 358 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Gm44711-201ENSMUST00000205414 1264 ntBASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ccdc180J3QNE4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.22
Ccdc180J3QNE4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Ccdc180J3QNE4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ccdc180J3QNE4 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc180J3QNE4 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc180J3QNE4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc180J3QNE4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC22.64■■□□□ 1.21
Ccdc180J3QNE4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc180J3QNE4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc180J3QNE4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc180J3QNE4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ccdc180J3QNE4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC22.64■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms