Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.84□□□□□ -0.35
Ccdc149F6V035 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc149F6V035 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc149F6V035 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc149F6V035 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc149F6V035 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.83□□□□□ -0.35
Ccdc149F6V035 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc149F6V035 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc149F6V035 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.83□□□□□ -0.35
Ccdc149F6V035 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc149F6V035 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm13315-201ENSMUST00000120376 991 ntBASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm24990-201ENSMUST00000157406 323 ntBASIC12.83□□□□□ -0.36
Ccdc149F6V035 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm16505-201ENSMUST00000179981 232 ntBASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm28882-201ENSMUST00000185504 314 ntBASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Rps4l-202ENSMUST00000204242 789 ntBASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc149F6V035 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.82□□□□□ -0.36
Ccdc149F6V035 Gm14277-201ENSMUST00000121195 360 ntBASIC12.82□□□□□ -0.36
Ccdc149F6V035 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Rmrp-201ENSMUST00000157463 271 ntBASIC12.82□□□□□ -0.36
Ccdc149F6V035 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.82□□□□□ -0.36
Ccdc149F6V035 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.82□□□□□ -0.36
Ccdc149F6V035 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc149F6V035 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms