Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Gm27320-201ENSMUST00000184892 109 ntBASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Gm28882-201ENSMUST00000185504 314 ntBASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb9E9Q5G2 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm15547-201ENSMUST00000122152 333 ntBASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm23119-201ENSMUST00000158610 140 ntBASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm8885-201ENSMUST00000189382 598 ntBASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm9257-201ENSMUST00000221254 232 ntBASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm24136-201ENSMUST00000083374 165 ntBASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb9E9Q5G2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Pcdhb9E9Q5G2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Pcdhb9E9Q5G2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms