Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm28043E0CXC2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.7□□□□□ -0.38
Gm28043E0CXC2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm28043E0CXC2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Gm28043E0CXC2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Gm28043E0CXC2 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm15806-201ENSMUST00000120696 955 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Gm28043E0CXC2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm17794-201ENSMUST00000220252 955 ntBASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.68□□□□□ -0.38
Gm28043E0CXC2 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Gm28043E0CXC2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms