Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm16479-201ENSMUST00000121706 932 ntBASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav18A0A075B656 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.35□□□□□ -0.75
Trav18A0A075B656 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm23984-201ENSMUST00000157139 203 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm8810-201ENSMUST00000172895 754 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm37922-201ENSMUST00000195596 455 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm7287-201ENSMUST00000205267 602 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.34□□□□□ -0.75
Trav18A0A075B656 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav18A0A075B656 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms