Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm6266-201ENSMUST00000203844 806 ntBASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.65□□□□□ -0.38
H2afb2S4R1M3 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
H2afb2S4R1M3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
H2afb2S4R1M3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
H2afb2S4R1M3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Gm12384-201ENSMUST00000119228 919 ntBASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Gm5745-201ENSMUST00000183748 313 ntBASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Rubie-203ENSMUST00000227803 2430 ntBASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H2afb2S4R1M3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Gm9630-201ENSMUST00000178304 885 ntBASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.63□□□□□ -0.39
H2afb2S4R1M3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H2afb2S4R1M3 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.62□□□□□ -0.39
H2afb2S4R1M3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
H2afb2S4R1M3 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 150.2 ms