Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Gm7851-201ENSMUST00000117574 323 ntBASIC14.75□□□□□ -0.05
Scn11aQ9R053 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.75□□□□□ -0.05
Scn11aQ9R053 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Mir7686-201ENSMUST00000200604 57 ntBASIC14.75□□□□□ -0.05
Scn11aQ9R053 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scn11aQ9R053 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.74□□□□□ -0.05
Scn11aQ9R053 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.74□□□□□ -0.05
Scn11aQ9R053 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.74□□□□□ -0.05
Scn11aQ9R053 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Gm26286-201ENSMUST00000104166 134 ntBASIC14.74□□□□□ -0.05
Scn11aQ9R053 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Gm17889-201ENSMUST00000198410 598 ntBASIC14.74□□□□□ -0.05
Scn11aQ9R053 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.74□□□□□ -0.05
Scn11aQ9R053 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.74□□□□□ -0.05
Scn11aQ9R053 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gm44711-201ENSMUST00000205414 1264 ntBASIC14.73□□□□□ -0.05
Scn11aQ9R053 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gm21811-201ENSMUST00000096485 930 ntBASIC14.73□□□□□ -0.05
Scn11aQ9R053 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gm11511-201ENSMUST00000118146 540 ntBASIC14.73□□□□□ -0.05
Scn11aQ9R053 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gm25881-201ENSMUST00000157783 103 ntBASIC14.73□□□□□ -0.05
Scn11aQ9R053 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.73□□□□□ -0.05
Scn11aQ9R053 Gm45550-201ENSMUST00000209380 946 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms