Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Gm28630-201ENSMUST00000187806 498 ntBASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Gm35960-201ENSMUST00000202712 767 ntBASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ssr3Q9DCF9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Gm3436-201ENSMUST00000179930 840 ntBASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Gm26035-201ENSMUST00000083065 308 ntBASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ssr3Q9DCF9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ssr3Q9DCF9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm22065-201ENSMUST00000103753 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm22066-201ENSMUST00000103761 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm24932-201ENSMUST00000103763 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm24115-201ENSMUST00000103799 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm22190-201ENSMUST00000103827 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm22191-201ENSMUST00000103831 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm24721-201ENSMUST00000103849 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm28018-201ENSMUST00000103869 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm26399-201ENSMUST00000103937 110 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm12485-201ENSMUST00000119641 291 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Gm13813-201ENSMUST00000120998 787 ntBASIC11.27□□□□□ -0.61
Ssr3Q9DCF9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms