Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gm10076-201ENSMUST00000073238 384 ntBASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Rrp8Q9DB85 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rrp8Q9DB85 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rrp8Q9DB85 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Gm13611-201ENSMUST00000118269 318 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Gm29787-201ENSMUST00000222129 849 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rrp8Q9DB85 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm12015-201ENSMUST00000117065 843 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm29615-201ENSMUST00000185371 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm28224-201ENSMUST00000186078 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm29001-201ENSMUST00000186177 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm28292-201ENSMUST00000186593 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm28101-201ENSMUST00000187608 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm29076-201ENSMUST00000187689 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm28302-201ENSMUST00000187931 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm28646-201ENSMUST00000188220 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm28205-201ENSMUST00000189177 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm29032-201ENSMUST00000189797 697 ntBASIC12.38□□□□□ -0.43
Rrp8Q9DB85 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms