Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm15240-201ENSMUST00000118156 720 ntBASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm6415-201ENSMUST00000118488 348 ntBASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3a3Q9D554 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm25287-201ENSMUST00000103846 110 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm22918-201ENSMUST00000103855 110 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm4995-201ENSMUST00000117247 432 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm11779-201ENSMUST00000118541 368 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm25911-201ENSMUST00000157621 56 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3a3Q9D554 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Sf3a3Q9D554 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Gm24158-201ENSMUST00000175263 71 ntBASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Gm27533-201ENSMUST00000183800 152 ntBASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sf3a3Q9D554 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms