Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Khdc3Q9CWU5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Gm12390-201ENSMUST00000117897 397 ntBASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Gm22121-201ENSMUST00000175148 54 ntBASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Gm19163-201ENSMUST00000223313 780 ntBASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Khdc3Q9CWU5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Khdc3Q9CWU5 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Khdc3Q9CWU5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Khdc3Q9CWU5 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Khdc3Q9CWU5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Khdc3Q9CWU5 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm16177-201ENSMUST00000120728 718 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm12363-201ENSMUST00000122250 668 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm17150-201ENSMUST00000165577 381 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm7029-201ENSMUST00000173226 450 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.14□□□□□ -0.47
Khdc3Q9CWU5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms