Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Gm10012-201ENSMUST00000078252 192 ntBASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Mir339-201ENSMUST00000083659 96 ntBASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Rnf135Q9CWS1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm12384-201ENSMUST00000119228 919 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm14704-201ENSMUST00000120300 874 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm24644-201ENSMUST00000157114 139 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm24196-201ENSMUST00000179161 110 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm5370-201ENSMUST00000187187 574 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Gm43179-201ENSMUST00000198797 275 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rnf135Q9CWS1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Gm10156-201ENSMUST00000122364 462 ntBASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rnf135Q9CWS1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms